質粒名稱: | pU6-Sp-pegRNA-HEK3_CTT_ins |
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出品公司: | 愛迪基因 |
目錄編號: | 132778 |
存儲實驗室: | David Liu |
載體骨架基本信息 |
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載體名稱: | pU6 |
載體抗性: | 氨芐青霉素 |
載體類型: | 哺乳細胞表達 |
高拷貝/低拷貝: | 高拷貝 |
生長條件: | 37 ℃ |
插入基因信息 |
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插入基因名稱: | HEK3_CTT_ins pegRNA |
物種來源: | Synthetic |
插入大小: | 821 bp |
基因突變: | See manuscript |
啟動子 | U6 |
克隆方法: | Ligation Independent克隆 |
5' 測序引物 | GACTATCATATGCTTACCGT |
文獻引用方法 |
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材料和方法部分: | pU6-Sp-pegRNA-HEK3_CTT_ins was a gift from David Liu (Addgene plasmid # 132778 ; //n2t.net/addgene:132778 ; RRID:Addgene_132778) |
參考文獻部分: | Search-and-replace genome editing without double-strand breaks or donor DNA. Anzalone AV, Randolph PB, Davis JR, Sousa AA, Koblan LW, Levy JM, Chen PJ, Wilson C, Newby GA, Raguram A, Liu DR. Nature. 2019 Oct 21. pii: 10.1038/s41586-019-1711-4. doi: 10.1038/s41586-019-1711-4. 10.1038/s41586-019-1711-4 PubMed 31634902 |
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pU6-Sp-pegRNA-HEK3_CTT_ins載體質粒基本信息
pU6-Sp-pegRNA-HEK3_CTT_ins質粒圖譜載體圖譜和pU6-Sp-pegRNA-HEK3_CTT_ins載體序列質粒序列多克隆位點信息
pU6-Sp-pegRNA-HEK3_CTT_ins質粒載體簡介
pU6-Sp-pegRNA-HEK3_CTT_ins質粒序列載體序列
LOCUS pU6-Sp-pegRNA-HEK3_CTT_ins 2305 bp ds-DNA circular SYN 18-OCT-2019 DEFINITION S. pyogenes pegRNA for CTT insertion at the HEK3 site of human cells using prime editing. ACCESSION . VERSION . KEYWORDS pU6-Sp-pegRNA-HEK3_CTT_ins SOURCE synthetic DNA construct ORGANISM synthetic DNA construct REFERENCE 1 (bases 1 to 2305) TITLE Liu Lab plasmids JOURNAL Unpublished REFERENCE 2 (bases 1 to 2305) AUTHORS . TITLE Direct Submission JOURNAL Exported Oct 18, 2019 from SnapGene Server 1.1.58 //www.snapgene.com FEATURES Location/Qualifiers source 1..2305 /organism="synthetic DNA construct" /mol_type="other DNA" misc_RNA 29..104 /label=gRNA scaffold /note="guide RNA scaffold for the Streptococcus pyogenes CRISPR/Cas9 system" rep_origin complement(234..822) /direction=LEFT /label=ori /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of replication" primer_bind complement(314..333) /label=pBR322ori-F /note="pBR322 origin, forward primer" CDS complement(993..1853) /codon_start=1 /gene="bla" /product="beta-lactamase" /label=AmpR /note="confers resistance to ampicillin, carbenicillin, and related antibiotics" /translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS LIKHW" primer_bind 1616..1635 /label=Amp-R /note="Ampicillin resistance gene, reverse primer" promoter complement(1854..1958) /gene="bla" /label=AmpR promoter promoter 2065..2305 /label=U6 promoter /note="RNA polymerase III promoter for human U6 snRNA" primer_bind 2065..2085 /label=hU6-F /note="Human U6 promoter, forward primer" primer_bind 2236..2255 /label=LKO.1 5' /note="Human U6 promoter, forward primer" ORIGIN 1 gaaacaccgg cccagactga gcacgtgagt tttagagcta gaaatagcaa gttaaaataa 61 ggctagtccg ttatcaactt gaaaaagtgg gaccgagtcg gtcctctgcc atcaaagcgt 121 gctcagtctg tttttttaag cttgggccgc tcgaggtacc tctctacata tgacatgtga 181 gcaaaaggcc agcaaaaggc caggaaccgt aaaaaggccg cgttgctggc gtttttccat 241 aggctccgcc cccctgacga gcatcacaaa aatcgacgct caagtcagag gtggcgaaac 301 ccgacaggac tataaagata ccaggcgttt ccccctggaa gctccctcgt gcgctctcct 361 gttccgaccc tgccgcttac cggatacctg tccgcctttc tcccttcggg aagcgtggcg 421 ctttctcata gctcacgctg taggtatctc agttcggtgt aggtcgttcg ctccaagctg 481 ggctgtgtgc acgaaccccc cgttcagccc gaccgctgcg ccttatccgg taactatcgt 541 cttgagtcca acccggtaag acacgactta tcgccactgg cagcagccac tggtaacagg 601 attagcagag cgaggtatgt aggcggtgct acagagttct tgaagtggtg gcctaactac 661 ggctacacta gaagaacagt atttggtatc tgcgctctgc tgaagccagt taccttcgga 721 aaaagagttg gtagctcttg atccggcaaa caaaccaccg ctggtagcgg tggttttttt 781 gtttgcaagc agcagattac gcgcagaaaa aaaggatctc aagaagatcc tttgatcttt 841 tctacggggt ctgacgctca gtggaacgaa aactcacgtt aagggatttt ggtcatgaga 901 ttatcaaaaa ggatcttcac ctagatcctt ttaaattaaa aatgaagttt taaatcaatc 961 taaagtatat atgagtaaac ttggtctgac agttaccaat gcttaatcag tgaggcacct 1021 atctcagcga tctgtctatt tcgttcatcc atagttgcct gactccccgt cgtgtagata 1081 actacgatac gggagggctt accatctggc cccagtgctg caatgatacc gcgagaccca 1141 cgctcaccgg ctccagattt atcagcaata aaccagccag ccggaagggc cgagcgcaga 1201 agtggtcctg caactttatc cgcctccatc cagtctatta attgttgccg ggaagctaga 1261 gtaagtagtt cgccagttaa tagtttgcgc aacgttgttg ccattgctac aggcatcgtg 1321 gtgtcacgct cgtcgtttgg tatggcttca ttcagctccg gttcccaacg atcaaggcga 1381 gttacatgat cccccatgtt gtgcaaaaaa gcggttagct ccttcggtcc tccgatcgtt 1441 gtcagaagta agttggccgc agtgttatca ctcatggtta tggcagcact gcataattct 1501 cttactgtca tgccatccgt aagatgcttt tctgtgactg gtgagtactc aaccaagtca 1561 ttctgagaat agtgtatgcg gcgaccgagt tgctcttgcc cggcgtcaat acgggataat 1621 accgcgccac atagcagaac tttaaaagtg ctcatcattg gaaaacgttc ttcggggcga 1681 aaactctcaa ggatcttacc gctgttgaga tccagttcga tgtaacccac tcgtgcaccc 1741 aactgatctt cagcatcttt tactttcacc agcgtttctg ggtgagcaaa aacaggaagg 1801 caaaatgccg caaaaaaggg aataagggcg acacggaaat gttgaatact catactcttc 1861 ctttttcaat attattgaag catttatcag ggttattgtc tcatgagcgg atacatattt 1921 gaatgtattt agaaaaataa acaaataggg gttccgcgca catttccccg aaaagtgcca 1981 cctgacgtcg ctagctgtac aaaaaagcag gctttaaagg aaccaattca gtcgactgga 2041 tccggtacca aggtcgggca ggaagagggc ctatttccca tgattccttc atatttgcat 2101 atacgataca aggctgttag agagataatt agaattaatt tgactgtaaa cacaaagata 2161 ttagtacaaa atacgtgacg tagaaagtaa taatttcttg ggtagtttgc agttttaaaa 2221 ttatgtttta aaatggacta tcatatgctt accgtaactt gaaagtattt cgatttcttg 2281 gctttatata tcttgtggaa aggac //